Publications

119. Deepak KS, Balapure A, Priya PR, Kumar PS, Dubey SK, Javed A, Chattopadhyay S and Goel S(2024) Development of microfluidic device for the dual detection and quantification of ammonia and urea from blood stream. Sensors and Actuators: A- Physical (In Press), (IF: 4.6).

118. Sengupta P, Dutta A, Yelisetty V S, Roychowdhury T, Banerjee N, Dutta A, Halder S, Jana K, Mukherjee G, Chattopadhyay S, Govindaraju T and Chatterjee S (2024) G-quadruplex structural dynamics at MAPK12 promoter dictates transcriptional switch to determine stemness in breast cancer. Cellular and Molecular Life Sciences, 2024 (IF: 9.3).

117. Nucleic Acid Biology and its Application in Human Diseases, Nature Springer Publications, Edited by S Chatterji and Samit Chattopadhyay. 2023

116. Pramanik SK*, Sreedharan S, Tiwari R, Dutta S, Kandoth N, Barman S, Aderinto SO, Chattopadhyay S*, Das A* and Thomas JA* (2022) Nanoparticles for super-resolution microscopy: intracellular delivery and molecular targeting. Chemical Society Reviews (Royal Society of Chemistry), DOI: 10.1039/d1cs00605c *Corresponding author (IF: 60.615).

115. Choksi A, Pant R, Nakka KK, Singh M, Upreti A and Chattopadhyay S (2023) Dysregulated alternative pre-mRNA splicing and cancer progression. Nucleic Acid Biology and its Application in Human Diseases, Nature Springer Publication, Pages 61-104.

114. Choudhary P, Biswas S, Kandoth N, Tayde D, Chatterjee A, Chattopadhyay S, Das A Swarnakar and Pramanik SK (2022) Graphene quantum dots to control ROS-mediated gastric damage (2022), iScience, Cell Press. 25, 104062, doi: 10.1016/j.isci. 2022.104062 (IF: 6.1)

113. Nandi SK, Roychowdhury T, Chattopadhyay S, Basu S, Chatterjee K, Choudhury P, Banerjee N, Saha P, Mukhopadhyay A, Mukhopadhyay S and Bhattacharya R (2022) Deregulation of the CD44-NANOG-MDR1 associated chemoresistance pathways of breast cancer stem cells potentiates the anti-cancer effect of Kaempferol in synergism with Verapamil. Toxicology and Applied Pharmacology, Jan 19, 2022, Vol 19, 437, doi: 10.1016/j.taap.2022.115887 (IF: 4.5)

112. Suseela Y V, Sengupta P, Roychowdhury T, Panda S, Talukdar S, Chattopadhyay S, Chatterjee S and Govindaraju T (2022) Targeting oncogene promoters and ribosomal RNA biogenesis by G-Quadruplex binding ligands translate to anticancer activity. ACS Bio and Medicinal Chemistry, Au, 2, 125-139. ((IF: 2.1).

111. Parulekar A, Choksi A, Taye N, Totakura VS, Firmal P, Kundu GC and Chattopadhyay S (2021) SMAR1 suppresses the cancer stem cell population via hTERT repression in colorectal cancer cells. The International Journal of Biochemistry and Cell Biology, Sep 20;141:106085. doi: 10.1016/j.biocel.2021.106085 (IF: 5.7).

110. Firmal P, Shah VK, Pant R and Chattopadhyay S (2021) RING finger protein TOPORS modulates the expression of tumor suppressor SMAR1 in colorectal cancer via TLR4-TRIF pathway. Molecular Oncology, 21st Oct, 2021, DOI: 10.1002/1878-0261.13126 (IF: 6.6)

109. Pant R, Alam A, Choksi A, Shah VK, Firmal P and Chattopadhyay S (2021) Chromatin remodeling protein SMAR1 regulates adipogenesis by modulating the expression of PPARγ. BBA-Molecular and Cell Biology of Lipids, https://doi.org/10.1016/j.bbalip.2021.159045 (IF: 5.2).

108. Choksi A, Parulekar A, Pant R, Shah VK, Nimma R, Firmal P, Singh S, Kundu GC, Shukla S and Chattopadhyay S (2021) Tumor suppressor SMAR1 regulates PKM alternative splicing by HDAC6-mediated deacetylation of PTBP1, Cancer and Metabolism, https://doi.org/10.1186/s40170-021-00252 (IF: 6.0).

107. Pant R, Firmal P, Shah VK, Alam A and Chattopadhyay S (2021) Epigenetic regulation of adipogenesis in development of metabolic syndrome. Frontiers in Cell and Developmental Biology 2021 Jan 12;8:619888. doi: 10.3389/fcell.2020.619888. (IF: 6.7)

106. GhatakD, DattaA, RoychoudhuryT, ChattopadhyayS and Roychoudhury S (2021)MicroRNA-324-5p-CUEDC2 axis mediates gain-of-function Mutant p53-Driven cancer stemness. Molecular Cancer Research, 19:1635–1650, doi: 10.1158/1541-7786.MCR-20-0717 (IF: 5.9)

105. Ghosh A, Roychowdhury T, Nandi R, Maiti R, Ghosh NN, Molla SA, Mukhopadhyay S, Prodhan C, Chaudhury K, Das, Sarkar NK, Chattopadhyay S, Bhattacharya R, Bose CK and Maiti DK (2021) Inhibitory role of a smart nano-trifattyglyceride of Moringa oleifera root in epithelial ovarian cancer, through attenuation of FSHR - c-Myc axis. Journal of Traditional and Complementary Medicine, doi.org/10.1016/j.jtcme.2021.03.005 (IF: 4.5)

104. Mukherjee M, Das D, Sarkar J, Banerjee N, Jana J, Bhat J, Reddy JG, Bharatam J, Chattopadhyay S, Chatterjee S and Chakrabarti P (2021), Prion derived tetrapeptide stabilizes thermolabile insulin via conformational trapping. iScience, Cell Press, 2021; 24:102573 https://doi.org/ 10.1016/j.isci.2021.102573, (IF: 6.1)

103. Tiwari R, Banerjee S, Tyde D, Saha K D, Ethiarajan A, Mukherjee N, Chattopadhyay S, Pramanik S K, Das A (2021) Redox-Responsive Nanocapsules for the Spatiotemporal Release of Miltefosine in Lysosome: Protection against Leishmania, Bioconjugate Chemistry, 32, 245−253, DOI: 10.1021/acs.bioconjchem.0c00667. (IF: 6.1)

102. Dutta A, Roy A, Roy L, Chattopadhyay S and Chatterjee, S (2021) Immune Response and possible therapeutics in COVID-19, RSC Advances, 11, 960–977. (IF: 4.0).

101. Firmal P, Shah VK and Chattopadhyay S (2020) Insight into TLR4 mediated immunomodulation in normal pregnancy and related disorders. Frontiers in Immunology, 19 May 2020, doi.org/10.3389/fimmu.2020.00807 (IF: 7.6)

100. Roychaudhury T and Chattopadhyay S (2020) Chemical decorations of "MARs" residents in orchestrating eukaryotic gene regulation, Frontiers in Cell and Developmental Biology, 2020 Dec 21;8:602994. doi: 10.3389/fcell.2020.602994 (IF: 6.7)

99. ShahVK, FirmalP, AlamA, GangulyD and Chattopadhyay S (2020) Overview of immune response during SARS-CoV-2 infection: Lessons from the past. Frontiers in Immunology, 2020 Aug 7; 11:1949. doi: 10.3389/fimmu.2020.01949. eCollection 2020.PMID: 32849654 (IF: 8.8)

98. Patel S, Alam A, Pant R and Chattopadhyay S (2020) Wnt signaling and its significance within the tumor microenvironment: Novel therapeutic insights. Frontiers in Immunology. 16;10:2872. doi: 10.3389/fimmu.2019.02872. Review. (IF: 8.7).

97. Bhattacharya A, Mukherjee S, Khan P, Banerjee S, Dutta A, Banerjee N, Sengupta D, Basak U, Chakraborty S, Dutta A, Chattopadhyay S, Jana K, Sarkar KD, Chatterjee S and Das T (2020) Stemness factors repress SMAR1 to bestow drug resistance in cancer stem cells: Reversal by Aspirin. Science Signaling, 20; 13 (654), doi: 10.1126/scisignal.aay6077 (IF: 9.7).

96. AlamA, TayeN, PatelS, ThubeM, MullickJ, ShahVK, PantR, RoychowdhuryT, BanerjeeN, ChatterjeeS, BhattacharyaR, RoyR, MukhopadhyayA, MogareD and Chattopadhyay S (2019)SMAR1 favors immunosurveillance of cancer cells by modulating calnexin and MHC I expression Neoplasia, (10):945-962. doi: 10.1016/j.neo.2019.07.002.Epub 2019 Aug 15 (IF: 5.7).

95. Raychaudhuri D, Bhattacharya R, Sinha BP, Shiu C, Liu C, Ghosh A R, Rahaman O, Bandopadhyay P, Sarif, D'Rozario R, Paul S, Das A, Sarkar DK, Chattopadhyay S and Ganguly D (2019) Pro-Tumor reprogramming in intratumoral plasmacytoid dendric cells, Frontiers in Immunology (In Press), doi: 10.3389/fimmu.2019.01878 (IF: 4.8).

94. Narwade N, Patel S, Alam A, Chattopadhyay S, Mittal SPK and Kulkarni A (2019) Mapping of scaffold/ matrix attachment regions in human genome: A data mining exercise. Nucleic Acids Research 2019 Aug 22;47 (14):7247-7261. doi: 10.1093/nar/gkz562 (IF: 11.6).

93. Sengupta P, Banerjee N, Roychowdhury T, Dutta A, Chattopadhyay S and Chatterjee S (2018) Site-specific amino acid substitution in dodecameric peptides determines the stability and unfolding of c-MYC quadruplex promoting apoptosis in cancer cells, Nucleic Acids Research. 22(8): 1165-1186 (IF: 11.6).

92. Taye N, Alam A, Ghorai S, Chatterji D G, Parulekar A, Mogare D, Singh S, Sengupta P, Chatterjee S, Bhat M K, Santra M K, Salunkhe P B, Finston S K and Chattopadhyay S. (2018) SMAR1 inhibits Wnt/β-catenin signaling and prevents colorectal cancer progression. Oncotarget, 20;9(30): 21322-21336. (IF: 5.3)

91. Bhagat PN, Jadhav SH, Chattopadhyay S, Paknikar KM. (2018) Carbon nanospheres mediated nuclear delivery of SMAR1 protein (DNA binding domain) controls breast tumor in mice model. Nanomedicine (London). 2018 Feb;13(4):353-372; doi: 10.2217/nnm-2017-0298. (IF: 6.7)

90. Mirlekar B, Gautam D, Chattopadhyay S. (2017) Chromatin Remodeling Protein SMAR1 Is a Critical Regulator of T Helper Cell Differentiation and Inflammatory Diseases. Frontiers in Immunology. 2017 Feb 9;8:72. doi: 10.3389/fimmu. 2017.00072. eCollection 2017. (IF: 5.7)

89. Patel S, Choksi A, Pant R, Alam A and Chattopadhyay S. (2017) Nutritional programming of metabolic syndrome: Role of nutrients in shaping the epigenetics. A Handbook of nutrition, diet and epigenetics. Springer International Publishing AG 2017. DOI 10.1007/978-3-319-31143-2_42-1

88. Paul D, Ghorai S., ChattopadhyayS., Dinesh US, Shetty P and SantraMK (2017) Cdc20 directs proteasome-mediated degradation of the tumor suppressor SMAR1 in higher grades of cancer through the anaphase promoting complex. Cell Death and Disease, NPG, In press. (IF: 5.4)

87. Sengupta P, Chattopadhyay S, Chatterjee S., (2017) G-Quadruplex surveillance in BCL-2 gene: a promising therapeutic intervention in cancer treatment. Drug Discovery Today, 22(8): 1165-1186. (IF: 7.0).

86. Chatterjee B, Banoth B, Mukherjee T, Taye N, Vijayaragavan B, Chattopadhyay S, Gomes J, Basak S. (2016) Delayed IkBa synthesis insulates TLR4 induced canonical RelA/NFkB pathway from non-canonical LTbR signaling in myelomonocytic cells. Science Signaling, AAAS, 2016 Dec 6;9 (457): ra120, (IF: 7.5)

85. Ramu V, Aute S, Taye N, Guha R, Walker MG, Mogare D, Parulekar A, Thomas JA, Chattopadhyay S and Das A. (2017) Photo-induced cytotoxicity and anti-metastaticactivity of ruthenium(II)–polypyridyl complexesQ1 functionalized with tyrosine or tryptophan. Dalton Transaction. 2017 May 5. doi: 10.1039/c7dt00670e. [Epub ahead of print] (IF: 4.6)

84. Agarwalla H, Mahajan PS, Sahu D, Taye N, Bishwajit Ganguly B, Mhaske SB, Chattopadhyay S, Das A. (2016) A Switch-On NIR Probe for Specific Detection of Hg2+ Ion in Aqueous Medium and in Mitochondria. Inorganic Chemistry. (IF: 4.82)

83. Anila HA, Ali F, Kushwaha SA, Taye N, Chattopadhyay S, Das A. (2016) A Cysteine Specific Fluorescent Switch for Monitoring Oxidative Stress and Quantification of Aminoacylase-1 in Blood Serum. Analytical Chemistry. 2016 Dec 20; 88 (24): 12161-12168. doi: 10.1021/acs.analchem.6b03066. (IF: 5.7)

82. Mathai J, Mittal SP, Alam A, Ranade P, Mogare D, Patel S, Saxena S, Ghorai S, Kulkarni AP, and Chattopadhyay S. (2016) SMAR1 binds to T(C/G) repeat and inhibits tumor progression by regulating miR-371-373 cluster. Scientific Reports (NPG) 2016 Sep 27;6:33779. doi: 10.1038/srep33779. PMID: 27671416. (IF: 5.3).

81. Chemmannur SV, Bhagat P, Mirlekar B, Paknikar KM and Chattopadhyay S. (2016) Carbon nanospheres mediated delivery of nuclear matrix protein SMAR1 to direct experimental autoimmune encephalomyelitis in mice. International Journal of Nanomedicine (12;11:2039-51. doi: 10.2147/IJN.S93571. (IF: 4.4).

80. Ali F, Anila HA, Taye N, Mogare DG, Chattopadhyay S, Das A. (2016) Specific receptor for hydrazine: mapping the in situ release of hydrazine in live cells and in an in vitro enzymatic assay. Chemical Communications (Cambridge). 2 (36): 6166-9. doi: 10.1039/c6cc01787h. Epub 2016 Apr 14. (IF: 6.8)

79. Pal S, Ramu V, Taye N, Mogare DG, Yeware AM, Sarkar D, Reddy DS, Chattopadhyay S, Das A. (2016) GSH Induced Controlled Release of Levofloxacin from a Purpose-Built Prodrug: Luminescence Response for Probing the Drug Release in Escherichia coli and Staphylococcus aureus. Bioconjugate Chemistry. 21;27(9):2062-70. doi: 10.1021/acs.bioconjchem.6b00324. Epub 2016 Aug 26. (IF: 4.6).

78. Yadav B, Malonia SK, Majumdar SS, Gupta P, Wadhwa N, Badhwar A, Gupta UD, Katoch VM, Chattopadhyay S. (2015) Constitutive expression of SMAR1 confers susceptibility to Mycobacterium tuberculosis infection in a transgenic mouse model. Indian Journal of Medical Research. 2015 Dec; 142(6):732-41. doi: 10.4103/0971-5916.174566.

77. Mirlekar B, Majumdar S, Khetmalas M, Chattopadhyay S. Regulation of T cell lineage commitment by SMAR1 during inflammatory & autoimmune diseases. (2015) Indian J Medical Res. 2015 Oct; 142(4):405-13. doi: 10.4103/0971-5916.169198.

76. NakkaK, ChaudharyN, JoshiS, BhatJ, ChatterjeeS, Mazumdar M, AdhikaryA, MukherjeeS, DeA, SantraM K, DasT and Chattopadhyay, S. (2015) ERK-MAPK signal-dependent and -independent regulation of alternative splicing by SMAR1 through Sam68 deacetylation. PNAS (30;112(26):E3374-83. doi: 10.1073/pnas.1418603112. (IF: 9.5).

75. Padhye P, Alam A, Ghorai S, Chattopadhyay S, Poddar P. (2015) Doxorubicin-conjugated β-NaYF4:Gd(3+)/Tb(3+) multifunctional, phosphor nanorods: a multi-modal, luminescent, magnetic probe for simultaneous optical and magnetic resonance imaging and an excellent pH-triggered anti-cancer drug delivery nanovehicle. Nanoscale. 2015 Dec 14;7(46):19501-18. doi: 10.1039/c5nr04473a. Epub 2015 Nov 5. (IF: 7.5).

74. Reddy G U, A AH, Ali F, Taye N, Chattopadhyay S, Das A. (2015) FRET-Based Probe for Monitoring pH Changes in Lipid-Dense Region of Hct116 Cells. Organic Letters. 2015 Nov 20;17(22):5532-5. doi: 10.1021/acs.orglett.5b02568. Epub 2015 Nov 2. (IF: 6.5).

73. Khan D., Chattopadhyay S. and Das S. (2015) Influence of metabolic stress on translation of p53 isoforms. Molecular and Cellular Oncology, 015 May 5;3(1):e1039689. doi: 10.1080/23723556.

72. Mirlekar B, Ghorai S.,KhetmalasM and ChattopadhyayS. (2015) Nuclear Matrix Protein SMAR1 control regulatory T cell fate during Inflammatory Bowel Disease (IBD), Mucosal Immunology (Nature Publishing Group) 15 Nov; 8(6): 1184-200. (IF: 7.5).

71. Chemmannur S, Badhwar A J, Mirlekar B, Malonia SK, Gupta M, Wadhwa N, Bopanna R, Mabalirajan U, Majumdar S, GhoshB and Chattopadhyay S. (2015) A critical role of the nuclear MAR binding protein SMAR1 in lung homeostasis through the regulation of T cell differentiation. Mucosal Immunology (Nature Publishing Group) 2015 Nov; 8(6):1201-11. doi: 10.1038/mi. 2015.11. Epub 2015 Mar 4. (IF: 7.5).

70. Chaudhary N, Nakka K K, Pavithra L, Bhat J, Chatterjee S and Chattopadhyay S (2014) SMAR1 coordinates HDAC6-induced deacetylation of Ku70 and dictates cell fate upon irradiation. Cell Death and Disease, (Nature Publishing Group) 2014 Oct 9, e1447; doi: 10.1038. (IF: 6.1).

69. Anila HA, Reddy GU, Ali F, Taye N, Chattopadhyay S, Das A. (2015) A reagent for specific recognition of cysteine in aqueous buffer and in natural milk: imaging studies, enzymatic reaction and analysis of whey protein. Chemical Communications (Camb). 2015 Nov 4;51(85):15592-5. doi: 10.1039/c5cc04876a. (IF: 6.8).

68. Ali F, H A A, Taye N, Gonnade RG, Chattopadhyay S, Das A. A (2015) A fluorescent probe for specific detection of cysteine in the lipid dense region of cells. Chemical Communications (Camb). 2015 Dec 11;51(95):16932-5. doi: 10.1039/c5cc07450a. (IF: 6.8).

67. Mirlekar B, Patil S, Bopanna R, Chattopadhyay S. (2015) MAR binding protein SMAR1 favors IL-10 mediated regulatory T cell function in acute colitis. Biochem Biophys Res Commun. 2015 Aug 21; 464 (2): 647-53. doi: 10.1016/j.bbrc.2015.07.028

66. Khan D, Katoch Al, Das A, Lal R, Sharathchandra A, Chattopadhyay S and Das Saumitra (2015), Reversible induction of translational isoforms of p53 in glucose-deprivation Cell Death and Differentiation, (Nature Publishing Group) (In Press). (IF: 8.5).

65. Ali F, Saha S, Maity A, Taye N, Si MK, Suresh E, Ganguly B, Chattopadhyay S, Das A. (2015) Specific Reagent for Cr(III): Imaging Cellular Uptake of Cr(III) in Hct116 Cells and Theoretical Rationalization. Journal of Physical Chemistry B. 2015 Oct 15; 119 (41): 13018-26. doi: 10.1021/acs.jpcb.5b07565. Epub 2015 Oct 2. (IF: 3.2).

64. Reddy U G, Firoj Ali, Taye N, Chattopadhyay S and Das A (2015). A new turn on Pd2+-specific fluorescence probe and its use as an Imaging reagent for cellular uptake in Hct116 cells. Chemical Communications, (Cambridge) 2015 Feb 28;51(17):3649-52. doi: 10.1039/c4cc10171e. (IF: 6.8).

63. Malonia SK., Yadav B, Sinha S, Lazennec G and Chattopadhyay S (2014) Chromatin remodeling protein SMAR1 regulates NF-kB dependent Interleukin-8 (IL-8) transcription in breast cancer. The International Journal of Biochemistry and Cell Biology, 2014 Sep 18; 55C:220-226. doi: 10.1016/j.biocel.2014.09.008. [Epub ahead of print]. (IF: 4.5).

62. Reddy G U, Ramu V., Roy S., Taye N., Chattopadhyay S. and Das A. (2014) A specific probe for Hg2+ to delineate even H+ in pure aqueous buffer / Hct116 colon cancer cells: Hg(II)-η2-arene π-interaction and a TBET-based fluorescence response. Chemical Communications (Cambridge), 2014 Oct 23; 50(92): 14421-4. (IF: 6.8).

61. Reddy G U, Agarwalla H, Taye N, Ghorai S, Chattopadhyay S, Das A. (2014) A novel fluorescence probe for estimation of Cysteine/ Histidine in human blood plasma and recognition of endogenous Cysteine in live Hct116 cells. Chemical Communications, (Cambridge) 2014 Jul 31; 50(69):9899-902. doi: 10.1039/c4cc04214j. (IF: 6.8).

60. Chakraborty S, Das K, Saha S, Mazumdar M, Manna A, Chakraborty S, Mukherjee S, Khan P, Adhikary A, Mohanty S, Chattopadhyay S, Biswas S, Sa G, Das T. (2014) Nuclear matrix protein SMAR1 represses c-Fos-mediated HPV18 E6 transcription through alteration of chromatin histone de-acetylation.Journal of Biological Chemistry, Journal of Biological Chemistry 2014. Aug 25. pii: jbc.M114.564872. [Epub ahead of print] (IF: 4.6).

59. Chakraborty S, Adhikary A, Mazumdar M, Mukherjee S, Bhattacharjee P, Guha D. Choudhuri T, Chattopadhyay S, Sa G, Sen A and Das T, (2014) Capsaicin-induced activation of p53-SMAR1 auto-regulatory loop down-regulates VEGF in non-small cell lung cancer to restrain angiogenesis. PLoS ONE, 13; 9 (6), 1-11. Wiley Publications (IF: 4.4).

58. Mittal S P., Kulkarni A. P., Mathai J., Chattopadhyay S. and Pal J. K. (2014) Dose-dependent differential response of mammalian cells to cytoplasmic stress is mediated through the heme-regulated eIF2a kinase. International Journal of Biochemistry and Cell Biology 2014 Jul 31;54C:186-197. doi: 10.1016/j.biocel.2014.07.016. (IF: 4.5).

57. Patel S, Choksi A and Chattopadhyay S (2014) Understanding Inter-individual Epigenetic Variations in Obesity and its Management. Personalized Epigenetics, Book chapter, Elsevier publication (In Press).

56. Chemmannur S and Chattopadhyay S (2014) Role of nuclear matrix associated region (MAR) binding proteins in the regulation of T helper cell differentiation. Proceedings of Indian National Science Academy, June 2 issue, 2014.

55. Adhikary A, Chakraborty S, Mazumdar M, Ghosh S, Mukherjee S, Manna A, Mohanty S, Nakka KK, Joshi S, De A, Chattopadhyay S, Sa G, Das T. (2014) Inhibition of epithelial to Mesenchymal transition by E-cadherin up-regulation via repression of Slug transcription and inhibition of E-cadherin degradation: Dual role of SMAR1 in breast cancer cells. Journal of Biological Chemistry, Jul 30. 2014 pii: jbc.M113.527267. [Epub ahead of print] (IF: 4.6).

54. Dhar A., Mallick S., Maiti A., Ghosh P.;F Ahmed, I., Bhattacharyya S., Mandal T., Manna A., Singh S., Nayak D., Wilder, P., Markowitz, J., Weber D., Ghosh M., Chattopadhyay S., Guha, R., Konar A., Bandyopadhyay S. and Roy S. (2014) Simultaneous inhibition of key growth pathways in melanoma cells and tumor regression by a designed bidentate constrained helical peptide. Biopolymers. 101 (4): 344-358. (IF: 3.0).

53. Mittal S P, Mathai J, Kulkarni A P, Pal JK and Chattopadhyay S. (2013) miR-320a regulates erythroid differentiation through MAR binding protein SMAR1. International Journal of Biochemistry and Cell Biology, 45 (11):2519-2529. (IF: 4.5).

52. Singh S, Raina V, Chavali P L, Dubash T, Kadreppa S, Parab P, Chattopadhyay S. (2012) Regulation of GAD65 expression by SMAR1 and p53 upon Streptozotocin treatment. BMC Molecular Biology. 1 ; 13:28. (IF: 3.5)

51. Sinha S,Malonia SK, Mittal P K S, Pal J K and Chattopadhyay S. (2012) Tumor suppressor SMAR1 regulates p53 mediated transactivation by inhibiting acetyl transferase p300. International Journal of Biochemistry and Cell Biology, 44 (1): 46-52. (IF: 5.0).

50. Malonia SK, Sinha S, Pavithra L, Singh K, Jalota-Bhadhwar A, Rampalli S, Kaul-Ghanekar R. and Chattopadhyay, S., (2011) Gene regulation by SMAR1 and its role as candidate tumor suppressor. BBA Reviews on Cancer, pp 1-12 (IF: 12.0).

49. Chaudhary N, Nakka KK, Maulik N. and Chattopadhyay S. (2011) Epigenetic Manifestation of Metabolic Syndrome and Dietary Management. Antioxidants and Redox Signaling, In Press (IF: 8.5).

48. Sen GS, Mohanty S, Hossain DM, Bhattacharyya S, Banerjee S, Chakraborty J, Saha S, Ray P, Bhattacharjee P, Mandal D, Bhattacharya A, Chattopadhyay S, Das T and Sa G. (2011) Curcumin enhances the efficacy of chemotherapy by tailoring p65 NFkB-p300 cross-talk in favor of p53-p300 in breast cancer. Journal of Biological Chemistry, 286 (49):42232-47. (IF: 6.0).

47. Sinha S,Malonia SK, Mittal SPK, Singh K, Kadreppa S, Kamat R., Mukhopadhyaya R., Pal JK and Chattopadhyay, S. (2010) Coordinated regulation of p53 apoptotic targets BAX and PUMA by SMAR1 through an identical MAR element, EMBO Journal. 29, 830-842. (IF: 10.5)

46. Singh S, Sreenath K, Pavithra L, Roy S, Chattopadhyay, S. (2010), SMAR1 regulates free radical stress through modulation of AKR1a4 enzyme activity. International Journal of Biochemistry and Cell Biology. 42 (7): 1105-14. (IF: 5.0)

45. Sreenath K., Pavithra L., Singh S, Sinha S_,Raut S, Dash PK., Siddappa NB., Mangaiarkarasi A, Ranga UK, Mitra D. and Chattopadhyay, S. (2010) Nuclear Matrix Protein SMAR1 Represses HIV-1 LTR Mediated Transcription through Chromatin Remodeling. Virology, 25; 400(1): 76-85. (IF: 3.5)

44. Pavithra L., Sreenath K., Singh S. and Chattopadhyay, S. (2010) Heat shock protein 70 binds to a novel sequence in 5’ UTR of tumor suppressor SMAR1 and regulates its mRNA stability upon PGA2 treatment. FEBS Letters, 19; 584(6): 1187-92. (IF: 3.0)

43. Singh K., Sinha S, Malonia SK and Chattopadhyay, S. (2010) Tumor Necrosis Factor alpha (TNF-alpha) regulates CD40 expression through SMAR1 phosphorylation. BiochemIcal and Biophysical Research Communication. 8; 391(2): 1255-61. (IF: 3.0)

42. Kopikar S., Choudhari A S., Kumari A., Chattopadhyay, S. and Kaul R (2010), Aqueous cinnamon extract (ACE-c) from the bark of Cinnamomum cassia causes apoptosis in human cervical cancer cell line (SiHa) through loss of mitochondrial membrane potential. BMC Cancer. 18; 10: 210. (IF: 3.0)

41. Pavithra L, Chavali S.and Chattopadhyay, S. (2010) Nutritional epigenetics- impact on metabolic syndrome. Review in book chapter “Nutrition, Epigenetic Mechanisms and Human Disease”. CRC Press. Taylor and Francis Group, LLC, pp 259-286.

40. Chattopadhyay, S. Protein decides arrest or death. Nature News, (2010) doi: 10.1038/ nindia. 2010.65; Published online, May 24 issue.

39. Singh K, Sinha S, Malonia SK, Bist P, Tergaonkar V, Chattopadhyay S. (2009) Tumor suppressor SMAR1 represses IkBα expression and inhibits p65 transactivation through MARs. Journal of Biological Chemistry, 9; 284 (2):1267-78. (IF: 6.0)

38. Pavithra L., Mukherjee S. Kadreppa S., Kar S., Sakaguchi K., Roy S. and Chattopadhyay S., (2009) SMAR1 forms ternary complex with p53-MDM2 and negatively regulates p53 mediated transcription. Journal of Molecular Biology, 388(4):691-702. (IF: 4.8)

37. Pavithra L, Singh S, Sreenath K, Chattopadhyay S. (2009) Tumor suppressor SMAR1 downregulates Cytokeratin 8 expression by displacing p53 from its cognate site. International Journal of Biochemistry and Cell Biology. 41(4): 862-71. (IF: 5.0)

36. Nakka K. and Chattopadhyay, S. (2009) Modulation of chromatin by MARs and MAR binding oncogenic transcription factor SMAR1. Molecular and Cellular Biochemistry, 336(1-2):75-84. (IF: 3.0)

35. Singh V B, Pavithra L, Chattopadhyay S, Pal JK., (2008) Stress-induced overexpression of the heme-regulated eIF-2alpha kinase is regulated by Elk-1 activated through ERK pathway. Biochemical and Biophysical Research Communication. 379(3): 710 (IF: 3.0)

34. Bavikar SN, Salunke DB, Hazra BG, Pore VS, Dodd RH, Thierry J, Shirazi F, Deshpande MV, Kadreppa S and Chattopadhyay S (2008), Synthesis of chimeric tetrapeptide-linked cholic acid derivatives: impending synergistic agents. Bioorganic and Medicinal Chemistry Letters, 18 (20):5512-7 (IF: 3.0)

33. Vatmurge. NS, Hazra BG, Pore VS, Shirazi F, Deshpande MV, Kadreppa S, Chattopadhyay S, and Gonade RG (2008) Synthesis and biological evaluation of bile acid dimers linked with 1, 2, 3-triazole and bis-beta-lactam. Organic and Biomolecular Chemistry. Oct 21; 6(20): 3823-30. (IF: 3.5)

32. Pavithra L, Rampalli S, Sinha S., Sreenath K., Pestell R. G. and Chattopadhyay S. (2007) Stabilization of SMAR1 mRNA by PGA2 involves a stem loop structure in the 5' UTR. Nucleic Acids Research, 35: 6004-6016. (IF: 7.5)

31. Singh, K. Mogare, D. Ramprasad O. G., Rajinikanth G., Pande, G. and Chattopadhyay, S. (2007) p53 Target gene SMAR1 is dysregulated in breast cancer: Its role in cancer cell migration and invasion. PLoS-ONE, 2(8): e660. (IF: 4.6)

30. Pavithra, L and Chattopadhyay, S. Chromatin and cancer: Reprogramming chaos in the cell. (2007). ) National Academy of Science, 30 (3 and 4), 71-82 (Lead article

29. Jalota-Badhwar, A., Kaul-Ghanekar, R., Mogare, D., Boppana, R., Packnikar, K. M. and Chattopadhyay, S. (2007) SMAR1-derived P44 peptide retains its tumor suppressor function through modulation of p53. Journal of Biological Chemistry, 282(13): 9902-13. (IF: 6.0)

28. Chattopadhyay S and Pavithra L. MARs and MARBPs: key modulators of gene regulation and disease manifestation. (2006). Chromatin and Disease: Book, Vol 41, Series: Subcellular Biochemistry, Edited by Kundu and Dasgupta, Springer Publication.

27. Rampalli, S., Pavithra, L., Bhatt A., Tapas K. Kundu and Chattopadhyay, S. (2005). Tumor suppressor SMAR1 mediates Cyclin D1 repression by recruitment of SIN3/HDAC1 complex. Molecular and Cellular Biology, Vol. 25 October, (IF: 8.2)

26. Kaul-Ghanekar, R., Majumdar, S., Jalota, A., Gulati, N., Dubey, N., Saha, B., Chattopadhyay, S. (2005) Abnormal V(D)J Recombination of T Cell Receptor {beta} Locus in SMAR1 Transgenic Mice. Journal of Biological Chemistry, 280 (10): 9450-9459. (IF: 6.5)

25. Sarkar A, Kulkarni A, Chattopadhyay S, Mogare D, Sharma KK, Singh K, Pal JK. (2005) Lead-induced upregulation of the heme-regulated eukaryotic initiation factor 2 alpha kinase is compromised by hemin in human K562 cells. Biochem. Biophys. Acta. Dec 30; 1732(1-3):15-22. Epub 2005.

24. Jalota A, Singh K, Pavithra L, Kaul R, Jameel S, Chattopadhyay S. (2005) Tumor suppressor SMAR1 activates and stabilizes p53 through its arginine-serine (RS) rich motif. Journal of Biological Chemistry, 280 (16), 16019-16029. (IF: 6.5)

23. Kulkarni, A, Ravi, D. S., Singh, K., Rampalli, S., Parekh, V., Mitra, D., Chattopadhyay, S. (2005) HIV-1 Tat modulates T-bet expression and induces Th1 type of immune response Biochemical and Biophysical Research Communication. 329 (2): 706-712. (IF: 3.0)

22. Kaul-Ghanekar, R., Jalota, A., L. Pavithra, Tucker, P. and Chattopadhyay, S. (2005) SMAR1 and Cux/CDP modulate chromatin and act as negative regulators of the TCRb enhancer (Eb). Nucleic Acids Research, 32; 16: 4862-4875. (IF: 7.5)

21. Kulkarni, A., Pavithra L, Rampalli, S., Mogare, D., Babu, K. Shiekh, G., Ghosh, S. and Chattopadhyay, S. (2005) HIV-1 integration sites are flanked by potential MARs that alone can act as promoters. Biochemical and Biophysical Research Communication, 322; 7672-77.

20. Kaul-Ghanekar, R., Jalota, A., L. Pavithra, Tucker, P. and Chattopadhyay, S. (2004) SMAR1 and Cux/CDP modulate chromatin and act as negative regulators of the TCRb enhancer (Eb). Nucleic Acids Research, 32; 16: 4862-4875. (IF: 7.5)

19. Kulkarni, A., Pavithra L, Rampalli, S., Mogare, D., Babu, K. Shiekh, G., Ghosh, S. and Chattopadhyay, S. (2004) HIV-1 integration sites are flanked by potential MARs that alone can act as promoters. Biochemical and Biophysical Research Communication, 322; 7672-77. (IF: 3.0)

18. Kaul, R., Mukherjee, S., Ahmed, F., Bhat, M. K., Chhipa, R., Galande, S. and Chattopadhyay, S. (2003) Direct interaction and activation of p53 by SMAR1 causes cell cycle arrest at G2/M phase and delays tumor growth in mice. International Journal of Cancer, 103 (5), 606-615 (Cover page picture) (IF: 4.6)

17. Rampalli, S., Kulkarni, A., Kumar, P., Mogare D., Galande, S., Mitra, D and Chattopadhyay, S. (2003) Stimulation of Tat independent transcriptional processivity from the HIV-1 LTR promoter by Matrix Attachment Regions. Nucleic Acids Research, 31, 3248-3256. (IF: 7.5)

16. Chattopadhyay S. (2003) Anticancer protein identified, Nature News, September issue.

15. Prasad, D. V., Parekh, V. V., Banerjee, P. P., Chattopadhyay, S., Kumar, A. and Mishra, G. C. (2002) The Th1-specific costimulatory molecule, m150, is a post-translational isoform of lysozyme-associated membrane protein-1. Journal of Immunology, 169 (4); 1801-9. (IF: 7.1)

14. Sarkar, A., Chattopadhyay, S., Kaul, R. and Pal, J. K. (2002) Lead exposure and heat shock inhibit cell proliferation in human HeLa and K562 cells by inducing expression and activity of the heme-regulated eIF-2-aKinase. Journal of Biochemistry, Molecular Biology & Biophysics, 6, 391-396. (IF: 3.0)

13. Whitehurst, C., Chattopadhyay, S. and Chen, J. (2000) Control of V(D)J recombinational accessibility of the Db1 gene segment at the TCRb locus by a germline promoter. Immunity, 10, 1-20. (IF: 21.0).

12. Chattopadhyay S., Kaul R., Charest A., Houseman, D. and Chen, J. SMAR1, a novel alternatively spliced gene product, binds to scaffold/ matrix associated region at TCRb locus. Genomics, 68, 93. 2000. (IF: 3.0)

11. Chattopadhyay, S., Whitehurst, C., E. and Chen, J. (1998) A nuclear matrix attachment region (MAR) upstream of the T cell receptor b ?gene enhancer binds Cux/ CDP and SATB1 and functions to repress transcription. Journal of Biological Chemistry, 45, 29838-29846. (IF: 6.5)

10. Chattopadhyay, S., Whitehurst, C., E., Schwenk, F. and Chen, J. (1998) Biochemical and functional analysis of chromatin changes of the T cell receptor ?gene locus during CD4-CD8- to CD4+CD8+ thymocyte differentiation. Journal of Immunology, 160, 1256-1267. (IF: 7.5)

9. Das, A., Pal, M., Garcia, M. J., Crossley, R., Whalen, W., Wolska, K., Byrd, R. A., Court, D., Costantino, N., Mazzula, M., Rees, W., von Hippel, P., Chattopadhyay, S., DeVito, J. and Ghosh, B., (1996) Components of a multiprotein-RNA complex that controls transcription elongation in E. coli phage lambda. Methods in Enzymology, 274: pp 374-402. (IF: 4.0)

8. Chattopadhyay, S., Hung, S. C., Das, A and Gottesman. M. E. (1995a) Interaction between the phage HK022 Nun protein and the nut RNA of phage lambda. PNAS, USA, 92: pp12131-12135. (IF: 11.0)

7. Chattopadhyay, S., Garcia, M.J. and Das, A. (1995b) Bipartite function of a small RNA hairpin in transcription anti-termination in bacteriophage lambda. PNAS, USA, 92: 4061-4065. (IF: 11.0)

6. Chattopadhyay, S., Garcia, J., Lazinski, D. and Das, A. (1991) Molecular basis of nut site recognition. Journal of Cellular Biochemistry, 15: 246.

5. Chattopadhyay, S. and Ghosh, R.K. (1989) The cloning and expression of transfer RNA gene cluster of Vibrio eltor phage e4. Virology, 171: 114. (IF: 3.5)

4. Nair, B., Oku,Y., Takeda,Y., Ghosh, A., Ghosh, R.K., Chattopadhyay, S., Pal, S. C., Kaper, B.J., Takeda, T. (1988) Toxin profiles of vibrio cholerae Non-01 from environmental sources in Calcutta, India. Applied and Environmental Microbiology, 54: 3180. (IF: 4.2)

3. Chattopadhyay, S. and Ghosh, R.K. (1988) Characterization of the transfer RNA coded by Vibrio eltor phage e4. Virology, 165: 606. (IF: 3.5)

2. Chattopadhyay, S. and Ghosh, R.K. (1988) Localization of the transfer RNA gene on the physical map of Vibrio eltor phage e4. Virology, 162: 337. (IF: 3.5)

1. Chattopadhyay S, Kinchington, Ghosh RK (1987) Characterization of Vibrio eltor Typing Phages: Properties of the Eltor Phage e_4.Journal of General Virology., May 1987 68: 1411-1416. (IF: 3.5).

**Total publication in national and international journals is 119 with h-Index: 39; i-index: 93, Total Citations: 4610.

BITS Pilani

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